Nanotechnology Now

Our NanoNews Digest Sponsors
Heifer International



Home > Press > Caltech scientists create DNA tubes with programmable sizes for nanoscale manufacturing

Abstract:
Scientists at the California Institute of Technology (Caltech) have developed a simple process for mass producing molecular tubes of identical--and precisely programmable--circumferences. The technological feat may allow the use of the molecular tubes in a number of nanotechnology applications.

Caltech scientists create DNA tubes with programmable sizes for nanoscale manufacturing

PASADENA, CA | Posted on August 29th, 2008

The molecular tubes are composed of wound-up strands of DNA. DNA has been considered an ideal construction material for self-assembling molecular structures and devices because two complementary DNA strands can automatically recognize and bind with each other. DNA has been used to form rigid building blocks, known as tiles, and these tiles can further assemble into extended lattice structures, including tubes. However, it has been difficult to control the diameters of such tubes.

Peng Yin, a senior postdoctoral scholar in bioengineering and computer science at Caltech's Center for Biological Circuit Design, along with his colleagues has designed a series of flexible, single-stranded DNA molecules, called single-stranded DNA tiles. Each single-stranded tile is exactly 42 bases long and contains four modular binding sites. By pairing up the complementary binding sites, these single-stranded tiles bind with each other in a particular orientation like Lego pieces snapped together, forming a tube composed of parallel DNA helices.

The circumference of the resulting tube is determined by the number of different 42-base pieces used in its construction. For example, four pieces create a tube with a circumference of 12 billionths of a meter (or 12 nanometers); five pieces, a 15-nanometer-circumference tube; and six pieces, an 18-nanometer tube.

"We are not the first to make DNA tubes with controlled circumferences. However, compared with previous approaches, our method is distinctively simple and modular," says Yin. The simplicity and modularity of their approach permits the description of the tube design using a simple graphical abstraction system developed earlier this year in the laboratory of Niles Pierce, associate professor_of applied and computational mathematics and bioengineering at Caltech.

Just as a variety of wood sizes are used in construction projects--two by four inches for framing walls, two by eight inches for roof rafters, or four by four inches for fence posts--having nanotubes of various, precisely controlled sizes provides their user with more options. In addition, nanotubes of different sizes have varying mechanical properties; for example, tubes with a smaller diameter are more flexible and tubes with a larger diameter are more rigid. The nanotubes might eventually serve as templates for manufacturing nanowires with controlled diameters; the diameters of electron-conducting nanowires would help determine the electronic properties of the devices they are used to construct.

"The simplicity of the single-stranded tile approach promises to enable us to design ever more complex self-assembling molecular systems. The work is simultaneously elegant and useful," says Erik Winfree, associate professor of computer science, computation and neural systems, and bioengineering at Caltech. Winfree's laboratory was the primary host of Yin's research at Caltech.

The paper, "Programming DNA Tube Circumferences," was published August 8 in the journal Science. Yin's coauthors are applied physics graduate student Rizal Hariadi and computer science postdoctoral scholar Sung Ha Park from Erik Winfree's group; bioengineering graduate student Harry Choi from Niles Pierce's group; and computer science graduate student Sudheer Sahu at Duke University; Thomas LaBean, associate research professor of computer science and chemistry at Duke University; and John Reif, professor of computer science at Duke University.

The work was funded by the Center for Biological Circuit Design at Caltech and the National Science Foundation.

Visit the Caltech Media Relations website at pr.caltech.edu/media.

####

For more information, please click here

Contacts:
Kathy Svitil

626-395-8022

Copyright © California Institute of Technology

If you have a comment, please Contact us.

Issuers of news releases, not 7th Wave, Inc. or Nanotechnology Now, are solely responsible for the accuracy of the content.

Bookmark:
Delicious Digg Newsvine Google Yahoo Reddit Magnoliacom Furl Facebook

Related News Press

News and information

Flexible electronics integrated with paper-thin structure for use in space January 17th, 2025

‘Brand new physics’ for next generation spintronics: Physicists discover a unique quantum behavior that offers a new way to manipulate electron-spin and magnetization to push forward cutting-edge spintronic technologies, like computing that mimics the human brain January 17th, 2025

Quantum engineers ‘squeeze’ laser frequency combs to make more sensitive gas sensors January 17th, 2025

How a milk component could eliminate one of the biggest challenges in treating cancer and other disease, including rare diseases: Nebraska startup to use nanoparticles found in milk to target therapeutics to specific cells January 17th, 2025

Molecular Machines

First electric nanomotor made from DNA material: Synthetic rotary motors at the nanoscale perform mechanical work July 22nd, 2022

Nanotech scientists create world's smallest origami bird March 17th, 2021

Controlling the speed of enzyme motors brings biomedical applications of nanorobots closer: Recent advances in this field have made micro- and nanomotors promising devices for solving many biomedical problems October 13th, 2020

Giant nanomachine aids the immune system: Theoretical chemistry August 28th, 2020

Molecular Nanotechnology

Quantum pumping in molecular junctions August 16th, 2024

Scientists push the boundaries of manipulating light at the submicroscopic level March 3rd, 2023

Scientist mimic nature to make nano particle metallic snowflakes: Scientists in New Zealand and Australia working at the level of atoms created something unexpected: tiny metallic snowflakes December 9th, 2022

First electric nanomotor made from DNA material: Synthetic rotary motors at the nanoscale perform mechanical work July 22nd, 2022

Discoveries

Autonomous AI assistant to build nanostructures: An interdisciplinary research group at TU Graz is working on constructing logic circuits through the targeted arrangement of individual molecules: Artificial intelligence should speed up the process enormously January 17th, 2025

‘Brand new physics’ for next generation spintronics: Physicists discover a unique quantum behavior that offers a new way to manipulate electron-spin and magnetization to push forward cutting-edge spintronic technologies, like computing that mimics the human brain January 17th, 2025

Quantum engineers ‘squeeze’ laser frequency combs to make more sensitive gas sensors January 17th, 2025

How a milk component could eliminate one of the biggest challenges in treating cancer and other disease, including rare diseases: Nebraska startup to use nanoparticles found in milk to target therapeutics to specific cells January 17th, 2025

Announcements

Quantum engineers ‘squeeze’ laser frequency combs to make more sensitive gas sensors January 17th, 2025

How a milk component could eliminate one of the biggest challenges in treating cancer and other disease, including rare diseases: Nebraska startup to use nanoparticles found in milk to target therapeutics to specific cells January 17th, 2025

The National Space Society Congratulates SpaceX on Starship’s 7th Test Flight: Latest Test of the Megarocket Hoped to Demonstrate a Number of New Technologies and Systems January 17th, 2025

The National Space Society Congratulates Blue Origin on the Inaugural Flight of New Glenn: The Heavy Lift Reusable Rocket Will Open New Frontiers and Provide Healthy Competition January 17th, 2025

NanoNews-Digest
The latest news from around the world, FREE




  Premium Products
NanoNews-Custom
Only the news you want to read!
 Learn More
NanoStrategies
Full-service, expert consulting
 Learn More











ASP
Nanotechnology Now Featured Books




NNN

The Hunger Project