Nanotechnology Now

Our NanoNews Digest Sponsors



Heifer International

Wikipedia Affiliate Button


android tablet pc

Home > Press > DNA gets new twist: Carnegie Mellon scientists develop unique 'DNA nanotags'

Abstract:
Carnegie Mellon University scientists have married bright fluorescent dye molecules with DNA nanostructure templates to make nanosized fluorescent labels that hold considerable promise for studying fundamental chemical and biochemical reactions in single molecules or cells. The work, published online Jan. 26 in "The Journal of the American Chemical Society," improves the sensitivity for fluorescence-based imaging and medical diagnostics.

DNA gets new twist: Carnegie Mellon scientists develop unique 'DNA nanotags'

PITTSBURGH, PA | Posted on January 26th, 2007

"Our DNA nanotags offer unprecedented densities of fluorescent dyes and, thus, the potential for extremely bright fluorescent labels," said graduate student Andrea Benvin, who developed the nanotags in the laboratory of Bruce Armitage, associate professor of chemistry in the Mellon College of Science (MCS) at Carnegie Mellon. "We've put it all into a very small package, which will allow us to detect molecules with great sensitivity without interfering with the biological processes we are trying to understand."

The high brightness of the nanotags should be of great help in detecting rare cancer cells within tissue biopsies, for example, which is important in determining whether treatments have been successful or if recurrence is likely, according to Armitage. In addition, DNA nanotags offer the opportunity to perform multicolor experiments. This feature is extremely useful for imaging applications, Armitage says, because the multiple colors can be seen simultaneously, requiring only one experiment using one laser and one fluorescence-imaging machine.

"For example, two different populations of cells, one healthy and the other cancerous, could be distinguished based on labeling them with different color fluorescent nanotags," Armitage said.

Benvin, Armitage and colleagues at Carnegie Mellon's Molecular Biosensor and Imaging Center modeled their DNA nanotags on the structure of phycobiliproteins. Found in certain types of algae, such as the red and blue algae in fresh and marine waters, these proteins contain multiple, fluorescent pigments that work together to absorb light energy that is then transferred to chlorophyll, where it is used for photosynthesis. The Carnegie Mellon team has mimicked this efficient light-harvesting process in the design of their DNA nanotags to create incredibly bright, fluorescent labels.

"The primary advantages of our system are the simplicity of its design combined with the ease with which the fluorescence brightness and color can be tuned," Armitage said.

To achieve greater brightness, the Carnegie Mellon team assembled well-defined nanostructured DNA templates that bind multiple fluorescent dye molecules between base pairs in the DNA helix (see image). This arrangement keeps dyes far enough away from each other to avoid canceling out each other's fluorescence. The DNA templates can also be modified to bind to other molecules or to the surface of a cell of interest. The innovative design creates nanotags with large light-harvesting capabilities and very high light-emission (fluorescence) intensities. Because the DNA can accommodate one dye for every two base pairs, a DNA nanostructure with 30 base pairs can bind up to 15 fluorescent dye molecules. The resulting dye-DNA complexes are approximately 15 times brighter than an individual dye molecule. And they can be made even brighter by simply increasing the number of base pairs in the DNA nanostructure.

Multicolor experiments are possible because the DNA nanotags contain "light-harvesting" dyes within the DNA helix that are excited by one wavelength of light and then transfer that excitation energy to "light-emitting" dyes on the nanotag's surface. The light-emitting dyes can fluoresce at a different color from the light-harvesting dye. For example, one type of DNA nanotag can act as an antenna that efficiently harvests blue light and transfers that light energy to another dye within the nanostructure. The second dye then emits orange, red or even infrared light. Changing the light-harvesting dyes allows even more variation in the fluorescence color, Armitage said.

The nanotags are easily assembled by mixing commercially available DNA strands and fluorescent dyes. And while the work described by the Carnegie Mellon team relied on a relatively simple two-dimensional DNA nanostructure, Armitage notes that the rapidly growing field of DNA nanotechnology is generating increasingly intricate three-dimensional nanostructures that should lead to further improvements in brightness.

"We really feel that this is the tip of the iceberg and that nanotags 100 times brighter than existing labels can be developed in any color," he said.

This work was supported by the American Chemical Society, the National Science Foundation, the National Institutes of Health and the Pennsylvania Department of Health.

####

About Carnegie Mellon University
Carnegie Mellon is a global research university of more than 10,000 students and more than 4,000 faculty and staff, recognized for its world-class arts and technology programs, collaboration across disciplines and innovative leadership in education.

At Carnegie Mellon, our core values innovation, creativity, problem-solving and collaborative teamwork provide the foundation for everything we do.

For more information, please click here

Contacts:
Lauren Ward

412-268-7761

Copyright © Carnegie Mellon University

If you have a comment, please Contact us.

Issuers of news releases, not 7th Wave, Inc. or Nanotechnology Now, are solely responsible for the accuracy of the content.

Bookmark:
Delicious Digg Newsvine Google Yahoo Reddit Magnoliacom Furl Facebook

Related News Press

Discoveries

Oregon researchers glimpse pathway of sunlight to electricity: Collaboration with Lund University uses modified UO spectroscopy equipment to study 'maze' of connections in photoactive quantum dots December 19th, 2014

Instant-start computers possible with new breakthrough December 19th, 2014

Creation of 'Rocker' protein opens way for new smart molecules in medicine, other fields December 18th, 2014

Iranian Scientists Use Nanotechnology to Increase Power, Energy of Supercapacitors December 18th, 2014

Announcements

Oregon researchers glimpse pathway of sunlight to electricity: Collaboration with Lund University uses modified UO spectroscopy equipment to study 'maze' of connections in photoactive quantum dots December 19th, 2014

Instant-start computers possible with new breakthrough December 19th, 2014

Aculon Hires New Business Development Director December 19th, 2014

Iranian Scientists Use Nanotechnology to Increase Power, Energy of Supercapacitors December 18th, 2014

Human Interest/Art

Longhorn beetle inspires ink to fight counterfeiting November 5th, 2014

Iran-Made Respiratory Nano Masks Provided to Hajj Pilgrims October 23rd, 2014

Japanese gold leaf artists worked on a nano-scale: Study demonstrates X-ray fluorescence spectroscopy is a non-destructive way to date artwork July 3rd, 2014

Harry Potter-style invisibility cloaks: A real possibility next Christmas? Forget socks and shaving foam, the big kids of tomorrow want an invisible cloak for Christmas December 19th, 2013

Nanobiotechnology

Scientists trace nanoparticles from plants to caterpillars: Rice University study examines how nanoparticles behave in food chain December 16th, 2014

FEI and Oregon Health & Science University Install a Complete Correlative Microscopy Workflow in Newly Built Collaborative Science Facility December 16th, 2014

UCLA engineers first to detect and measure individual DNA molecules using smartphone microscope December 15th, 2014

Biomimetic dew harvesters: Understanding how a desert beetle harvests water from dew could improve drinking water collection in dew condensers December 8th, 2014

NanoNews-Digest
The latest news from around the world, FREE




  Premium Products
NanoNews-Custom
Only the news you want to read!
 Learn More
NanoTech-Transfer
University Technology Transfer & Patents
 Learn More
NanoStrategies
Full-service, expert consulting
 Learn More










ASP
Nanotechnology Now Featured Books




NNN

The Hunger Project







© Copyright 1999-2014 7th Wave, Inc. All Rights Reserved PRIVACY POLICY :: CONTACT US :: STATS :: SITE MAP :: ADVERTISE